Glycobiology Advance Access originally published online on October 31, 2008
Glycobiology 2009 19(2):112-117; doi:10.1093/glycob/cwn121
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Communication |
Structural analysis of the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain
3 Structural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), Tsukuba, Ibaraki 305-0801
4 Department of Endocrinology, Faculty of Medicine, Kagawa University, Kagawa 761-0793
5 Department of Applied Biological Chemistry, Faculty of Agriculture, Shizuoka University, Shizuoka 422-8529, Japan
1 To whom correspondence should be addressed: Tel: +81-29-879-6177; Fax: +81-29-879-6179; e-mail: ryuichi.kato{at}kek.jp
Received on April 24, 2008; revised on October 10, 2008; accepted on October 27, 2008
Galectins are a family of β-galactoside-specific lectins bearing a conserved carbohydrate recognition domain. Interactions between galectins and poly-N-acetyllactosamine sequences are critical in a variety of biological processes. Galectin-9, a member of the galectin family, has two carbohydrate recognition domains at both the N- and C-terminal regions. Here we report the crystal structure of the human galectin-9 N-terminal carbohydrate recognition domain in complex with N-acetyllactosamine dimers and trimers. These complex structures revealed that the galectin-9 N-terminal carbohydrate recognition domain can recognize internal N-acetyllactosamine units within poly-N-acetyllactosamine chains. Based on these complex structures, we propose two putative recognition modes for poly-N-acetyllactosamine binding by galectins.
Key words: carbohydrate recognition / galectin / poly-N-acetyllactosamine / X-ray structure
2 Present address: Institute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan.